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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48809420_48810545_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48809420 - 48810545

Intron Length:

1126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACATAT

U12 Branch Point Sequence:

TTTTTGGTACAT

Flanking Amino Acid:

YMIAKSLMPQIIPGKKYAAR

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

79.9

Major BPS

66.4

0.41

61.3

Major PPT

78.3

0.64

0.9

77.2

31.6

Minor 5ss

35.2

-1.7

2.7

43.3

43.5

Minor BPS

42.2

-0.5

2.7

72.05

45.1

Associated Gene:

Gene:

TMTC3

Ensembl Gene ID:

ENSAPLG00000013102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045080

48803594 - 48837914

34321

ENSAPLT00000013652

48803594 - 48831870

28277