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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48815640_48820844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48815640 - 48820844

Intron Length:

5205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGAATG

5'SS Class:

major

3'SS Sequence:

GTTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TCTTGCTTACTA

Flanking Amino Acid:

PGDSSKTVLMALCLIVLPFI

Intron Amino Acid Position:

351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

69.9

40.3

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

84.4

0.77

0.8

77.4

36.9

Minor 5ss

43.3

-0.7

2.9

54.6

43.8

Minor BPS

56.5

0.2

70.44

42.7

Associated Gene:

Gene:

TMTC3

Ensembl Gene ID:

ENSAPLG00000013102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045080

48803594 - 48837914

34321

ENSAPLT00000013652

48803594 - 48831870

28277