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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48822173_48823716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48822173 - 48823716

Intron Length:

1544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTGTTAAAAACA

Flanking Amino Acid:

CVYEVFIAQGYTLPVLLDTA

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

39.9

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

0.97

0.6

88.6

20.7

Minor 5ss

39.2

-1.2

3.1

48.2

47.4

Minor BPS

46.4

-0.2

2.1

64.89

41.4

Associated Gene:

Gene:

TMTC3

Ensembl Gene ID:

ENSAPLG00000013102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045080

48803594 - 48837914

34321

ENSAPLT00000013652

48803594 - 48831870

28277