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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48823833_48824484_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48823833 - 48824484

Intron Length:

652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGATTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

GTCTTCTTGATT

Flanking Amino Acid:

TKSKGPDNTIVWTPIAVTVF

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

29.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

83.2

0.75

0.8

77.1

36.1

Minor 5ss

32.3

-2

3.3

42.9

44.7

Minor BPS

70.4

0.72

1.2

78.92

37.7

Associated Gene:

Gene:

TMTC3

Ensembl Gene ID:

ENSAPLG00000013102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045080

48803594 - 48837914

34321

ENSAPLT00000013652

48803594 - 48831870

28277