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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48824585_48827982_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48824585 - 48827982

Intron Length:

3398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAGGTAAA

5'SS Class:

major

3'SS Sequence:

CTTTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

AAAGGAATAATA

Flanking Amino Acid:

FAVHPIHTEAVTGVVGRAEL

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

74.5

37.6

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

89.4

0.89

0.6

88.9

20.3

Minor 5ss

34.1

-1.8

42.1

44.8

Minor BPS

-0.8

2.1

46.08

36.7

Associated Gene:

Gene:

TMTC3

Ensembl Gene ID:

ENSAPLG00000013102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013652

48803594 - 48831870

28277

ENSAPLT00000045080

48803594 - 48837914

34321