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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48830253_48830824_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

48830253 - 48830824

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CTATTTATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTATTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

85.9

25.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.7

0.76

0.8

81.6

34.4

Minor 5ss

43.9

-0.7

2.8

43.6

Minor BPS

57.5

0.31

1.8

76.23

41.2

Associated Gene:

Gene:

TMTC3

Ensembl Gene ID:

ENSAPLG00000013102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045080

48803594 - 48837914

34321

ENSAPLT00000013652

48803594 - 48831870

28277