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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48830936_48831781_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

48830936 - 48831781

Intron Length:

846

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGAGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

GTTTTCTTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

79.5

28.3

Major BPS

67.6

0.44

1.2

Major PPT

71.4

0.48

1.1

68.9

41.2

Minor 5ss

-1.9

2.8

41.3

38.3

Minor BPS

79.3

0.92

82.87

Associated Gene:

Gene:

TMTC3

Ensembl Gene ID:

ENSAPLG00000013102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013652

48803594 - 48831870

28277