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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48844395_48844947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48844395 - 48844947

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCAAACCTT

5'SS Class:

major

3'SS Sequence:

CACTATTTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGTAT

U12 Branch Point Sequence:

TTAGGCTTAGTA

Flanking Amino Acid:

KAGEEQAKCGKTVLYLLYCF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.2

68.9

41.6

Major BPS

59.8

0.24

1.5

60.1

46.3

Major PPT

67.2

0.39

1.1

67.1

37.7

Minor 5ss

34.5

-1.8

4.3

56.2

42.6

Minor BPS

48.8

-0

2.1

63.79

43.1

Associated Gene:

Gene:

CEP290

Ensembl Gene ID:

ENSAPLG00000011991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012604

48843225 - 48896388

53164