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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48849174_48849716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48849174 - 48849716

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAA

U12 Branch Point Sequence:

CTTGGTTGAATC

Flanking Amino Acid:

ELKNDLQKDKGLSTLAQQNR

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

63.9

0.34

1.2

40.9

Major PPT

88.9

0.88

0.7

81.2

36.4

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

46.8

-0.2

1.9

58.09

41.8

Associated Gene:

Gene:

CEP290

Ensembl Gene ID:

ENSAPLG00000011991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012604

48843225 - 48896388

53164