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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48849890_48850876_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48849890 - 48850876

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

TGGATTTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATGTTTATAATT

Flanking Amino Acid:

ALKRMKDYELGIYGLEEAVA

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

82.1

30.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

78.8

0.65

72.3

42.5

Minor 5ss

36.9

-1.5

2.9

47.6

42.5

Minor BPS

58.9

0.36

1.5

74.36

Associated Gene:

Gene:

CEP290

Ensembl Gene ID:

ENSAPLG00000011991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012604

48843225 - 48896388

53164