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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48851040_48851738_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48851040 - 48851738

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TACTGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

TTATGCATCATA

Flanking Amino Acid:

DENEELRERLGLEPKAMIDL

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

72.1

39.9

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

76.3

0.59

72.8

Minor 5ss

44.5

-0.6

3.2

64.5

46.9

Minor BPS

45.7

-0.3

2.3

64.88

41.8

Associated Gene:

Gene:

CEP290

Ensembl Gene ID:

ENSAPLG00000011991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012604

48843225 - 48896388

53164