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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48855934_48861561_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48855934 - 48861561

Intron Length:

5628

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCAGTTTAT

5'SS Class:

major

3'SS Sequence:

CTTTGTTTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATTAAAT

Flanking Amino Acid:

SYPSVQFLLNITQLKNEICL

Intron Amino Acid Position:

638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.8

0.28

1.4

60.7

40.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.6

0.62

0.9

35.1

Minor 5ss

32.6

-2

4.2

52.7

44.8

Minor BPS

65.4

0.56

1.9

88.15

35.9

Associated Gene:

Gene:

CEP290

Ensembl Gene ID:

ENSAPLG00000011991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012604

48843225 - 48896388

53164