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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48861712_48862741_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48861712 - 48862741

Intron Length:

1030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGAAAATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTTTTATTT

Flanking Amino Acid:

LNEYLIRLIQELENKEQLLK

Intron Amino Acid Position:

688

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

80.3

34.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

56.3

0.14

1.1

54.4

44.1

Minor 5ss

35.2

-1.7

3.1

49.5

46.7

Minor BPS

60.2

0.4

1.5

74.31

37.1

Associated Gene:

Gene:

CEP290

Ensembl Gene ID:

ENSAPLG00000011991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012604

48843225 - 48896388

53164