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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48867230_48868771_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48867230 - 48868771

Intron Length:

1542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TAGTTTTCAACT

Flanking Amino Acid:

QRTTNMEHMERENESLKAQI

Intron Amino Acid Position:

896

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

35.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

78.6

0.64

0.9

72.9

36.6

Minor 5ss

39.4

-1.2

3.3

57.2

Minor BPS

63.6

0.51

1.5

76.78

Associated Gene:

Gene:

CEP290

Ensembl Gene ID:

ENSAPLG00000011991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012604

48843225 - 48896388

53164