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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48872061_48872647_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48872061 - 48872647

Intron Length:

587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTGCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

TTCTCCTGCAAG

Flanking Amino Acid:

REMELKIEVSKLRELSDVAN

Intron Amino Acid Position:

1052

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

0.57

1.2

77.7

37.1

Major PPT

67.8

0.4

1.1

68.3

37.8

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

48.8

-0.2

2.1

61.48

45.9

Associated Gene:

Gene:

CEP290

Ensembl Gene ID:

ENSAPLG00000011991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012604

48843225 - 48896388

53164