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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48874052_48875177_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48874052 - 48875177

Intron Length:

1126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCTCTGT

5'SS Class:

weak_major

3'SS Sequence:

CATTTGTTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ACTATTATAATA

Flanking Amino Acid:

ALKDTRGAQKVIEWHLKMEE

Intron Amino Acid Position:

1242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.17

1.3

54.8

44.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

71.3

0.48

70.6

39.6

Minor 5ss

40.9

-1

3.1

57.8

46.2

Minor BPS

49.2

-0

1.6

58.5

35.4

Associated Gene:

Gene:

CEP290

Ensembl Gene ID:

ENSAPLG00000011991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012604

48843225 - 48896388

53164