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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48875343_48875578_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48875343 - 48875578

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

ACATTTGTTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

ATGTCATTATCA

Flanking Amino Acid:

LEEEIVQQNKLHEERQMAWD

Intron Amino Acid Position:

1297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.8

92.6

23.2

Major BPS

0.72

80.3

31.7

Major PPT

71.1

0.48

65.1

40.5

Minor 5ss

47.8

-0.2

2.5

68.3

42.6

Minor BPS

58.4

0.26

1.9

71.13

40.8

Associated Gene:

Gene:

CEP290

Ensembl Gene ID:

ENSAPLG00000011991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012604

48843225 - 48896388

53164