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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48886571_48888233_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48886571 - 48888233

Intron Length:

1663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TTTACCTCACTA

Flanking Amino Acid:

LERKLGNVRGAGRSGKTIPE

Intron Amino Acid Position:

2013

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

85.3

32.2

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

68.3

0.41

0.9

62.9

31.7

Minor 5ss

39.9

-1.1

2.8

46.6

41.8

Minor BPS

56.4

0.2

1.9

72.42

39.8

Associated Gene:

Gene:

CEP290

Ensembl Gene ID:

ENSAPLG00000011991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012604

48843225 - 48896388

53164