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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48888853_48889177_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48888853 - 48889177

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATCA

5'SS Class:

strong_major

3'SS Sequence:

TATTGAACAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTGAACA

Flanking Amino Acid:

NERLRKELKKEADSGEKLRI

Intron Amino Acid Position:

2109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.1

31.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

59.6

0.22

53.6

40.3

Minor 5ss

44.3

-0.6

2.8

57.2

47.1

Minor BPS

68.4

0.57

1.6

81.44

33.3

Associated Gene:

Gene:

CEP290

Ensembl Gene ID:

ENSAPLG00000011991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012604

48843225 - 48896388

53164