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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48898625_48900845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48898625 - 48900845

Intron Length:

2221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTAACAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTCCTTTTAACA

Flanking Amino Acid:

IGTNINANPYGLGSRKQPVH

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

79.1

37.5

Major BPS

89.7

0.98

0.7

89.9

Major PPT

62.4

0.28

1.1

63.8

34.9

Minor 5ss

44.3

-0.6

2.8

59.1

45.3

Minor BPS

71.9

0.68

1.2

75.92

35.5

Associated Gene:

Gene:

C12orf29

Ensembl Gene ID:

ENSAPLG00000013468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039930

48897693 - 48904562

6870

ENSAPLT00000014026

48897693 - 48904297

6605