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Intron Name: Anas_platyrhynchos_platyrhynchos_1_48912754_48912839_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48912754 - 48912839

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAATATG

5'SS Class:

strong_major

3'SS Sequence:

GGATTGTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TTTTTCCCATTT

Flanking Amino Acid:

RAIKEMCYKSGEYYRIHYPQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

76.9

38.1

Major BPS

0.72

78.4

31.2

Major PPT

61.4

0.26

1.1

58.3

47.1

Minor 5ss

38.8

-1.3

2.9

47.7

42.4

Minor BPS

48.6

-0

2.1

76.5

40.5

Associated Gene:

Gene:

C12orf50

Ensembl Gene ID:

ENSAPLG00000013487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033692

48910159 - 48920974

10816

ENSAPLT00000031074

48910159 - 48920974

10816

ENSAPLT00000014036

48910159 - 48920974

10816