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Intron Name: Anas_platyrhynchos_platyrhynchos_1_49092660_49098181_F

Intron Information:

Intron Rank:

134104

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49092660 - 49098181

Intron Length:

5522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCACCTGA

5'SS Class:

weak_major

3'SS Sequence:

TTCTCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTGAT

U12 Branch Point Sequence:

CTGTGCTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.3

0.24

1.5

56.8

Major BPS

66.1

0.4

1.3

59.3

47.1

Major PPT

0.88

0.6

84.2

23.6

Minor 5ss

44.2

-0.6

2.7

57.2

46.9

Minor BPS

59.3

0.37

1.8

74.24

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039476

49092518 - 49099119

6602