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Intron Name: Anas_platyrhynchos_platyrhynchos_1_49098316_49098787_F

Intron Information:

Intron Rank:

134103

Intron Class:

major

Intron Phase:

Intron Coordinates:

49098316 - 49098787

Intron Length:

472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ATCCCTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.9

0.65

0.8

77.1

30.8

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039476

49092518 - 49099119

6602

ENSAPLT00000035364

49096008 - 49099119

3112