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Intron Name: Anas_platyrhynchos_platyrhynchos_1_49235084_49235879_R

Intron Information:

Intron Rank:

145965

Intron Class:

major

Intron Phase:

Intron Coordinates:

49235084 - 49235879

Intron Length:

796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATGTAT

U12 Branch Point Sequence:

TTTTTGTTGAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

73.4

37.3

Major BPS

54.9

0.12

1.4

55.4

41.7

Major PPT

71.1

0.48

1.2

74.5

39.3

Minor 5ss

39.7

-1.2

3.1

48.1

Minor BPS

54.8

0.15

2.2

74.81

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043523

49230350 - 49236140

5791