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Intron Name: Anas_platyrhynchos_platyrhynchos_1_49978650_49982290_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

49978650 - 49982290

Intron Length:

3641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAACC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ATCTTCATAATT

Flanking Amino Acid:

RTELTEARVQVWFQNRRAKW

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.5

37.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

78.3

0.64

0.9

71.4

39.5

Minor 5ss

33.3

-1.9

3.1

43.9

43.5

Minor BPS

64.1

0.52

1.6

78.67

37.9

Associated Gene:

Gene:

ALX1

Ensembl Gene ID:

ENSAPLG00000001231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001229

49964688 - 49985172

20485