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Intron Name: Anas_platyrhynchos_platyrhynchos_1_50020422_50042934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50020422 - 50042934

Intron Length:

22513

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

ATAACAGCAAAA

Flanking Amino Acid:

TWPANAAYFEGEKEEFSQLD

Intron Amino Acid Position:

1354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

76.1

32.7

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

84.7

0.78

0.7

77.6

31.2

Minor 5ss

39.8

-1.1

2.8

Minor BPS

38.6

-0.8

2.2

50.9

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036011

49999748 - 50110314

110567

ENSAPLT00000032277

49994995 - 50110314

115320

ENSAPLT00000022146

49994995 - 50110314

115320

ENSAPLT00000000574

49999748 - 50110314

110567