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Intron Name: Anas_platyrhynchos_platyrhynchos_1_50071981_50080670_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50071981 - 50080670

Intron Length:

8690

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACATTTTTATCT

Flanking Amino Acid:

LILKNKAFELGIASSIDAAQ

Intron Amino Acid Position:

976

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

81.8

38.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.83

0.7

85.2

29.2

Minor 5ss

39.8

-1.1

3.2

51.2

45.5

Minor BPS

0.33

1.6

70.23

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022146

49994995 - 50110314

115320

ENSAPLT00000000574

49999748 - 50110314

110567

ENSAPLT00000036011

49999748 - 50110314

110567

ENSAPLT00000032277

49994995 - 50110314

115320

ENSAPLT00000022292

50040759 - 50110314

69556