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Intron Name: Anas_platyrhynchos_platyrhynchos_1_50104297_50105569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50104297 - 50105569

Intron Length:

1273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTATTGTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATT

Flanking Amino Acid:

ERMELELLHKKQQTVMEDEL

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

88.9

24.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.5

0.64

72.9

41.4

Minor 5ss

37.5

-1.4

2.8

51.2

45.3

Minor BPS

76.1

0.9

1.1

87.86

31.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032277

49994995 - 50110314

115320

ENSAPLT00000022292

50040759 - 50110314

69556

ENSAPLT00000022146

49994995 - 50110314

115320

ENSAPLT00000000574

49999748 - 50110314

110567

ENSAPLT00000036011

49999748 - 50110314

110567