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Intron Name: Anas_platyrhynchos_platyrhynchos_1_50106688_50108079_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

50106688 - 50108079

Intron Length:

1392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATTCTCT

5'SS Class:

weak_major

3'SS Sequence:

TAAACCCTATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGTTTATTAATG

Flanking Amino Acid:

KEDLEKNKERVLFEIENEDL

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.29

1.1

57.8

41.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

59.4

0.21

56.8

39.2

Minor 5ss

57.8

0.26

2.3

65.9

45.3

Minor BPS

64.1

0.3

1.6

68.96

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000574

49999748 - 50110314

110567

ENSAPLT00000036011

49999748 - 50110314

110567

ENSAPLT00000032277

49994995 - 50110314

115320

ENSAPLT00000022292

50040759 - 50110314

69556

ENSAPLT00000022146

49994995 - 50110314

115320