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Intron Name: Anas_platyrhynchos_platyrhynchos_1_50112801_50114887_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50112801 - 50114887

Intron Length:

2087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

ATTATATTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTCATATTGACT

Flanking Amino Acid:

TYHYEIVLPKLQFKTENRKM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

81.8

0.72

0.9

78.4

39.4

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

0.33

1.7

76.66

39.9

Associated Gene:

Gene:

TSPAN19

Ensembl Gene ID:

ENSAPLG00000021214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041131

50112750 - 50125050

12301