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Intron Name: Anas_platyrhynchos_platyrhynchos_1_50149233_50152278_R

Intron Information:

Intron Rank:

151676

Intron Class:

major

Intron Phase:

Intron Coordinates:

50149233 - 50152278

Intron Length:

3046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTATTGATACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

AAATACTAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

74.5

0.55

68.7

41.1

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

53.4

0.18

1.8

69.72

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029144

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026779

50144651 - 50152656

8006

ENSAPLT00000042869

50149089 - 50152656

3568