Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_5062036_5126452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5062036 - 5126452

Intron Length:

64417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCCTA

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TAAGCACAAACT

Flanking Amino Acid:

LDPLKGWKVLRETSTELSGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

68.9

43.8

Major BPS

77.9

0.69

0.8

75.9

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

40.1

-1.1

3.4

55.6

48.6

Minor BPS

43.5

-0.4

2.2

64.22

45.3

Associated Gene:

Gene:

CELF2

Ensembl Gene ID:

ENSAPLG00000010064

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034517

5061983 - 5428458

366476

ENSAPLT00000023819

5061983 - 5332374

270392