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Intron Name: Anas_platyrhynchos_platyrhynchos_1_51073042_51118578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51073042 - 51118578

Intron Length:

45537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAGGTTGT

5'SS Class:

major

3'SS Sequence:

TTGTCTTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TTCTATTGAAAT

Flanking Amino Acid:

SKVELTAFYPDRAIKTNQDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.7

0.4

1.1

63.4

43.8

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

84.5

0.78

0.7

80.3

31.8

Minor 5ss

41.8

-0.9

3.2

53.7

44.7

Minor BPS

54.8

0.23

1.7

75.14

41.3

Associated Gene:

Gene:

TMTC2

Ensembl Gene ID:

ENSAPLG00000013866

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017268

50922142 - 51166166

244025

ENSAPLT00000014455

50943056 - 51166166

223111