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Intron Name: Anas_platyrhynchos_platyrhynchos_1_51238370_51251093_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
51238370 - 51251093

Intron Length:
12724

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGTCGC

5'SS Class:
strong_major

3'SS Sequence:
TTATCCTTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTTTTATCC

Flanking Amino Acid:
LKKLELDDSKLPDSCIMDYY

Intron Amino Acid Position:
453

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.8
0.91
0.8
72.2
39.5

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
86.2
0.81
0.8
81.1
30.5

Minor 5ss
29.1
-2.4
2.8
35.6
41

Minor BPS
71.4
0.65
1.5
81.41
33.2

Associated Gene:

Gene:
METTL25

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

51236841 - 51296041
59201

51235780 - 51296493
60714

51235945 - 51298886
62942