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Intron Name: Anas_platyrhynchos_platyrhynchos_1_51296001_51296088_R


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
51296001 - 51296088

Intron Length:
88

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGTTAAGC

5'SS Class:
major

3'SS Sequence:
TGAAAACTCTAAG|A

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TTGTGAA

U12 Branch Point Sequence:
GTTTTGTGAAAA

Flanking Amino Acid:
AEKLINVHLFAL

Intron Amino Acid Position:
3

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.2
0.43
1
60.5
38.2

Major BPS
72.1
0.55
1.2
63.4
44.3

Major PPT
49.8
-0
1.1
50.2
42.7

Minor 5ss
34.5
-1.8
2.8
43.8
43.5

Minor BPS
48.1
-0.1
2.2
66.07
39.9

Associated Gene:

Gene:
METTL25

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

51235945 - 51296094
60150