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Intron Name: Anas_platyrhynchos_platyrhynchos_1_51296042_51298864_R


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
51296042 - 51298864

Intron Length:
2823

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTT|GTGAAACAA

5'SS Class:
weak_major

3'SS Sequence:
CTTTTCCATACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTCCATACAG

Flanking Amino Acid:
LRGWFWFYDDTFSNVFC

Intron Amino Acid Position:
8

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
56.6
0.16
1.1
52
34

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
82.5
0.73
0.8
77.2
30.6

Minor 5ss
27.8
-2.6
3.1
35.6
42.2

Minor BPS
54.2
-0
2.1
69.83
43

Associated Gene:

Gene:
METTL25

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

51235945 - 51298886
62942

51235945 - 51298886
62942