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Intron Name: Anas_platyrhynchos_platyrhynchos_1_51307065_51308958_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51307065 - 51308958

Intron Length:

1894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGATCTT

5'SS Class:

major

3'SS Sequence:

CATTTCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATAATC

Flanking Amino Acid:

IKAERAKKKEEAEKRRQQRE

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.1

41.1

Major BPS

100

1.24

0.5

100

Major PPT

81.4

0.71

0.8

78.2

34.5

Minor 5ss

38.1

-1.3

3.5

58.1

46.5

Minor BPS

72.2

0.68

1.5

82.87

30.2

Associated Gene:

Gene:

CCDC59

Ensembl Gene ID:

ENSAPLG00000007839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008131

51302446 - 51309220

6775