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Intron Name: Anas_platyrhynchos_platyrhynchos_1_51739816_51762460_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51739816 - 51762460

Intron Length:

22645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACATAA

5'SS Class:

major

3'SS Sequence:

CTATCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTCTTATACAT

Flanking Amino Acid:

EEELAAANQEIVALREQNAH

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

73.9

32.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

85.3

0.79

0.8

80.3

31.3

Minor 5ss

42.8

-0.8

2.9

48.2

Minor BPS

46.9

-0.1

1.9

71.05

39.8

Associated Gene:

Gene:

PPFIA2

Ensembl Gene ID:

ENSAPLG00000005353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020926

51525426 - 51842357

316932

ENSAPLT00000040913

51525426 - 51842357

316932

ENSAPLT00000019874

51525426 - 51842357

316932

ENSAPLT00000040788

51525426 - 51842357

316932

ENSAPLT00000005617

51621711 - 51842357

220647

ENSAPLT00000033226

51525426 - 51842357

316932

ENSAPLT00000031657

51525426 - 51842357

316932