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Intron Name: Anas_platyrhynchos_platyrhynchos_1_51787437_51787793_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51787437 - 51787793

Intron Length:

357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTATGTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TGGACCTTACAA

Flanking Amino Acid:

LEEKNQELQRARQREKMNEE

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

87.1

Major BPS

69.5

0.48

73.5

28.6

Major PPT

70.2

0.46

1.1

70.4

Minor 5ss

38.9

-1.3

2.8

43.1

43.9

Minor BPS

51.8

0.05

1.8

62.34

43.3

Associated Gene:

Gene:

PPFIA2

Ensembl Gene ID:

ENSAPLG00000005353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020926

51525426 - 51842357

316932

ENSAPLT00000040913

51525426 - 51842357

316932

ENSAPLT00000020003

51525426 - 51842357

316932

ENSAPLT00000040788

51525426 - 51842357

316932

ENSAPLT00000019874

51525426 - 51842357

316932

ENSAPLT00000033226

51525426 - 51842357

316932

ENSAPLT00000005617

51621711 - 51842357

220647

ENSAPLT00000031657

51525426 - 51842357

316932