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Intron Name: Anas_platyrhynchos_platyrhynchos_1_51795589_51796070_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51795589 - 51796070

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAATCCC

5'SS Class:

major

3'SS Sequence:

AATTCTTGGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TATATCCTAATT

Flanking Amino Acid:

RMGVRRDEPKVKSLGDHEWN

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.2

64.2

40.1

Major BPS

81.9

0.79

0.9

80.1

Major PPT

62.3

0.28

1.1

62.8

43.3

Minor 5ss

31.2

-2.1

2.7

37.6

39.7

Minor BPS

60.7

0.41

1.7

78.51

37.5

Associated Gene:

Gene:

PPFIA2

Ensembl Gene ID:

ENSAPLG00000005353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020003

51525426 - 51842357

316932

ENSAPLT00000040788

51525426 - 51842357

316932

ENSAPLT00000019874

51525426 - 51842357

316932

ENSAPLT00000033226

51525426 - 51842357

316932

ENSAPLT00000005617

51621711 - 51842357

220647

ENSAPLT00000031657

51525426 - 51842357

316932

ENSAPLT00000020926

51525426 - 51842357

316932

ENSAPLT00000040913

51525426 - 51842357

316932