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Intron Name: Anas_platyrhynchos_platyrhynchos_1_51803562_51809366_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51803562 - 51809366

Intron Length:

5805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGAAAT

5'SS Class:

major

3'SS Sequence:

TTTTTCAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CATTTTTCAACA

Flanking Amino Acid:

KKEKARLGQLRGYMETEAAA

Intron Amino Acid Position:

826

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

74.4

35.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

78.7

0.65

0.9

74.2

34.3

Minor 5ss

36.4

-1.5

3.1

46.1

42.9

Minor BPS

60.8

0.34

1.5

68.03

38.6

Associated Gene:

Gene:

PPFIA2

Ensembl Gene ID:

ENSAPLG00000005353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019874

51525426 - 51842357

316932

ENSAPLT00000033226

51525426 - 51842357

316932

ENSAPLT00000005617

51621711 - 51842357

220647

ENSAPLT00000031657

51525426 - 51842357

316932

ENSAPLT00000020926

51525426 - 51842357

316932

ENSAPLT00000040913

51525426 - 51842357

316932

ENSAPLT00000020003

51525426 - 51842357

316932

ENSAPLT00000040788

51525426 - 51842357

316932