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Intron Name: Anas_platyrhynchos_platyrhynchos_1_51835489_51835582_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51835489 - 51835582

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTGGTATCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATTTTTTACTT

Flanking Amino Acid:

LLQIPTQNTQARQILEREYN

Intron Amino Acid Position:

1133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.8

1.13

0.8

81.8

38.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.8

0.49

0.9

63.4

43.1

Minor 5ss

33.5

-1.9

48.7

47.5

Minor BPS

60.6

0.41

1.5

74.5

36.9

Associated Gene:

Gene:

PPFIA2

Ensembl Gene ID:

ENSAPLG00000005353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005617

51621711 - 51842357

220647

ENSAPLT00000031657

51525426 - 51842357

316932

ENSAPLT00000020926

51525426 - 51842357

316932

ENSAPLT00000040913

51525426 - 51842357

316932

ENSAPLT00000020003

51525426 - 51842357

316932

ENSAPLT00000040788

51525426 - 51842357

316932

ENSAPLT00000019874

51525426 - 51842357

316932

ENSAPLT00000033226

51525426 - 51842357

316932