Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_51936695_51937413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51936695 - 51937413

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTATGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

GTCTCTATGACA

Flanking Amino Acid:

GYQLQPPVVPEPTAPAKAKE

Intron Amino Acid Position:

623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

73.7

33.1

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

69.6

0.44

65.1

Minor 5ss

38.7

-1.3

2.9

47.9

47.8

Minor BPS

57.9

0.24

1.6

67.96

38.4

Associated Gene:

Gene:

L3MBTL2

Ensembl Gene ID:

ENSAPLG00000003563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040868

51934198 - 51951379

17182

ENSAPLT00000003683

51934198 - 51994187

59990