Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_51968858_51969320_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51968858 - 51969320

Intron Length:

463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGATTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTTTCTTTGATT

Flanking Amino Acid:

LYATMEKHKEVFFVIRLIAG

Intron Amino Acid Position:

1518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

Major BPS

0.85

0.9

39.9

Major PPT

79.8

0.67

0.9

77.1

36.1

Minor 5ss

33.1

-1.9

3.4

48.3

47.4

Minor BPS

83.7

1.14

0.9

94.68

Associated Gene:

Gene:

EP300

Ensembl Gene ID:

ENSAPLG00000010504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010961

51965047 - 52011278

46232