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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52083730_52085946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52083730 - 52085946

Intron Length:

2217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACCAT

5'SS Class:

major

3'SS Sequence:

TGTTGTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTTTCATGT

Flanking Amino Acid:

HYVKNNQLIKDGELVLLDGG

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

71.2

40.6

Major BPS

100

1.24

0.5

100

Major PPT

83.1

0.74

0.9

77.3

Minor 5ss

38.9

-1.2

3.3

55.8

48.4

Minor BPS

47.2

-0.1

69.63

41.9

Associated Gene:

Gene:

XPNPEP3

Ensembl Gene ID:

ENSAPLG00000010243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038792

52077971 - 52096515

18545

ENSAPLT00000010689

52077971 - 52096316

18346