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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52088854_52089339_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52088854 - 52089339

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

GGCTCCTTTACT

Flanking Amino Acid:

MKIAGRVTAEAFIETMFASK

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.9

44.2

Major BPS

76.8

0.67

0.9

75.9

Major PPT

84.6

0.78

0.7

80.6

31.5

Minor 5ss

-1.1

3.2

46.3

Minor BPS

67.7

0.64

1.7

78.02

43.7

Associated Gene:

Gene:

XPNPEP3

Ensembl Gene ID:

ENSAPLG00000010243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038792

52077971 - 52096515

18545

ENSAPLT00000010689

52077971 - 52096316

18346