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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52092213_52094631_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52092213 - 52094631

Intron Length:

2419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGTTC

5'SS Class:

major

3'SS Sequence:

TTTTTGTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TTTTTGTTCACA

Flanking Amino Acid:

PFTHPHLLKPGEVTPGLSQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

75.1

35.8

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

0.85

0.7

83.5

31.6

Minor 5ss

37.7

-1.4

3.2

50.5

46.2

Minor BPS

55.5

0.17

2.4

78.35

38.8

Associated Gene:

Gene:

XPNPEP3

Ensembl Gene ID:

ENSAPLG00000010243

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038792

52077971 - 52096515

18545

ENSAPLT00000010689

52077971 - 52096316

18346