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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52102394_52102878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52102394 - 52102878

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

TACTCATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

ATTTCCTAATGA

Flanking Amino Acid:

KMEAINALSEGELQKAVDLF

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

80.7

0.69

0.8

77.5

35.4

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

49.9

-0

2.2

69.36

43.2

Associated Gene:

Gene:

ST13

Ensembl Gene ID:

ENSAPLG00000009644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010065

52096801 - 52118575

21775