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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52252483_52253342_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52252483 - 52253342

Intron Length:

860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGTGC

5'SS Class:

major

3'SS Sequence:

TGCCTCCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

CTCTCCTCATCC

Flanking Amino Acid:

PRGLNQAVRKGQKPGLQVVP

Intron Amino Acid Position:

915

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

64.8

42.3

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

72.2

0.5

0.8

66.3

Minor 5ss

42.6

-0.8

3.2

59.3

45.5

Minor BPS

55.2

0.14

1.9

66.27

45.4

Associated Gene:

Gene:

MRTFA

Ensembl Gene ID:

ENSAPLG00000014434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021623

52173078 - 52256614

83537

ENSAPLT00000048237

52211943 - 52256614

44672

ENSAPLT00000021713

52173078 - 52255614

82537