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Intron Name: Anas_platyrhynchos_platyrhynchos_1_52252483_52254291_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

52252483 - 52254291

Intron Length:

1809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGTGC

5'SS Class:

major

3'SS Sequence:

TTGCTCCTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

TTGCTCCTAACA

Flanking Amino Acid:

PRGLNQAVRKPSSQPGSPAA

Intron Amino Acid Position:

915

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.2

64.8

42.3

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

74.7

0.56

0.9

70.1

35.2

Minor 5ss

42.6

-0.8

3.2

59.3

45.5

Minor BPS

61.6

0.36

1.7

73.32

38.2

Associated Gene:

Gene:

MRTFA

Ensembl Gene ID:

ENSAPLG00000014434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015060

52173078 - 52255614

82537